BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021B02SP1|AL427715
(979 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1659 1794 0.0
>3x_Contig1659
Length = 17570
Score = 1794 bits (898), Expect = 0.0
Identities = 954/978 (97%), Gaps = 2/978 (0%)
Strand = Plus / Plus
Query: 1 gatcggaaaaggtaatacagtttaccgaacttgggatgaccgaagttcggtttgcagggt 60
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3328 gatcggaaaaggtaaaatagtttaccgaacttgggatgaccgaagttcggtttgcagggt 3387
Query: 61 aacagagtggtacggtatggagaccatgcccgaggdtcgggcatgtntgttgttgttgtt 120
||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 3388 aacagagtggtacggtatggagaccatgcccgaggatcgggcatggttgttgttgttgtt 3447
Query: 121 gttgtagttgttttttttccactcttcaatatggaattccgttcgtcaacctttggaact 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3448 gttgttgttgttttttttccactcttcaatatggaattccgttcgtcaacctttggaact 3507
Query: 181 catcgtaaccctttgtaaacatcgattcgtaggaccggcggatcaactgtctcatatgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3508 catcgtaaccctttgtaaacatcgattcgtaggaccggcggatcaactgtctcatatgtt 3567
Query: 241 gggcggcttcctgaggagacttacccggaacaaacctgtttctcaagttcttgawtgtct 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 3568 gggcggcttcctgaggagacttacccggaacaaacctgtttctcaagttcttgattgtct 3627
Query: 301 tttgtgctttahagcagggtaagctgcacwctagcatgggtactattccatcgatgatca 360
||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 3628 tttgtgctttaaagcagggtaagctgctctctagcatgggtactattccatcgatgatca 3687
Query: 361 cgttcatgtagggtcttatacctaggaaagttgcaacgcatagatcttcgaattggactg 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 3688 cgttcatgtagggtcttatacctaggaaagttgcaacgcatagatcttcgaattgg-ctg 3746
Query: 421 aacgcctgggtgtgttggctaccgcccatgactttgaccatctcttttgttagcttgaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3747 aacgcctgggtgtgttggctaccgcccatgactttgaccatctcttttgttagcttgaag 3806
Query: 481 ggcacggcttcgaatttcactcccccaggcacgatatcgaatathahaccgaaatcaatg 540
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 3807 ggcacggcttcgaatttcactcccccaggcacgatatcgaatataaaaccgaaatcaatg 3866
Query: 541 tgtagacaatggccctgtgagtcgtacatgatattaccgttgtgtctatccttgaattgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3867 tgtagacaatggccctgtgagtcgtacatgatattaccgttgtgtctatccttgaattgt 3926
Query: 601 agtaggtaggagatgncgctgtaaggcntnaaaggatttcmcgaagttgtttcttgctct 660
||||||||||||||| ||||||||| | ||||||||| |||||||||||||||||||
Sbjct: 3927 agtaggtaggagatgacgctgtaag-cggctaaggatttcacgaagttgtttcttgctct 3985
Query: 661 ttggaattcaatggtactctcgttaccgaatttactgatgayatattcgtataatccatt 720
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 3986 ttggaattcaatggtactctcgttaccgaatttactgatgaaatattcgtataatccatt 4045
Query: 721 camagcttcacggcctaacatgtctcttgatatggagtctggtaagacgtcgatgacacc 780
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4046 cacagcttcacggcctaacatgtctcttgatatggagtctggtaagacgtcgatgacacc 4105
Query: 781 gcaccctggtgcartggcagtgactctgtaggggaagacgtacacgtctagtccgatgtg 840
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4106 gcaccctggtgcagtggcagtgactctgtaggggaagacgtacacgtctagtccgatgtg 4165
Query: 841 tgaccaaatggatctgaacaaagagatcagttgtaacgccaacacgtcttgtctacaawc 900
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 4166 tgaccaaatggatctgaacaaagagatcagttgtaacgccaacacgtcttgtctacaatc 4225
Query: 901 gtcaccaactttgaaaatggcactctgccatttctcctcagaatcgtcctttttcactct 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4226 gtcaccaactttgaaaatggcactctgccatttctcctcagaatcgtcctttttcactct 4285
Query: 961 gaacgtggccatgaaggg 978
||||||||||||||||||
Sbjct: 4286 gaacgtggccatgaaggg 4303
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5853
Number of Sequences: 1807
Number of extensions: 5853
Number of successful extensions: 402
Number of sequences better than 1.0e-20: 1
length of query: 979
length of database: 10,358,551
effective HSP length: 16
effective length of query: 963
effective length of database: 10,329,639
effective search space: 9947442357
effective search space used: 9947442357
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)